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An automated image analysis framework for segmentation and division plane detection of single live Staphylococcus aureus cells which can operate at millisecond sampling time scales using bespoke Slimfield microscopy

Lookup NU author(s): Dr Adam WollmanORCiD



This work is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).


© 2016 IOP Publishing Ltd. Staphylococcus aureus is an important pathogen, giving rise to antimicrobial resistance in cell strains such as Methicillin Resistant S. aureus (MRSA). Here we report an image analysis framework for automated detection and image segmentation of cells in S. aureus cell clusters, and explicit identification of their cell division planes. We use a new combination of several existing analytical tools of image analysis to detect cellular and subcellular morphological features relevant to cell division from millisecond time scale sampled images of live pathogens at a detection precision of single molecules. We demonstrate this approach using a fluorescent reporter GFP fused to the protein EzrA that localises to a mid-cell plane during division and is involved in regulation of cell size and division. This image analysis framework presents a valuable platform from which to study candidate new antimicrobials which target the cell division machinery, but may also have more general application in detecting morphologically complex structures of fluorescently labelled proteins present in clusters of other types of cells.

Publication metadata

Author(s): Wollman AJM, Miller H, Foster S, Leake MC

Publication type: Article

Publication status: Published

Journal: Physical Biology

Year: 2016

Volume: 13

Issue: 5

Online publication date: 17/10/2016

Acceptance date: 22/08/2016

Date deposited: 10/02/2020

ISSN (print): 1478-3967

ISSN (electronic): 1478-3975

Publisher: Institute of Physics Publishing


DOI: 10.1088/1478-3975/13/5/055002

PubMed id: 27749270


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