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Gill-associated bacteria are homogeneously selected in amphibious mangrove crabs to sustain host intertidal adaptation

Lookup NU author(s): Dr Marco FusiORCiD

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This work is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).


Abstract

BackgroundThe transition from water to air is a key event in the evolution of many marine organisms to access new food sources, escape water hypoxia, and exploit the higher and temperature-independent oxygen concentration of air. Despite the importance of microorganisms in host adaptation, their contribution to overcoming the challenges posed by the lifestyle changes from water to land is not well understood. To address this, we examined how microbial association with a key multifunctional organ, the gill, is involved in the intertidal adaptation of fiddler crabs, a dual-breathing organism.ResultsElectron microscopy revealed a rod-shaped bacterial layer tightly connected to the gill lamellae of the five crab species sampled across a latitudinal gradient from the central Red Sea to the southern Indian Ocean. The gill bacterial community diversity assessed with 16S rRNA gene amplicon sequencing was consistently low across crab species, and the same actinobacterial group, namely Ilumatobacter, was dominant regardless of the geographic location of the host. Using metagenomics and metatranscriptomics, we detected that these members of actinobacteria are potentially able to convert ammonia to amino acids and may help eliminate toxic sulphur compounds and carbon monoxide to which crabs are constantly exposed.ConclusionsThese results indicate that bacteria selected on gills can play a role in the adaptation of animals in dynamic intertidal ecosystems. Hence, this relationship is likely to be important in the ecological and evolutionary processes of the transition from water to air and deserves further attention, including the ontogenetic onset of this association.


Publication metadata

Author(s): Fusi M, Ngugi DK, Marasco R, Booth JM, Cardinale M, Sacchi L, Clementi E, Yang X, Garuglieri E, Fodelianakis S, Michoud G, Daffonchio D

Publication type: Article

Publication status: Published

Journal: Microbiome

Year: 2023

Volume: 11

Online publication date: 24/08/2023

Acceptance date: 20/07/2023

Date deposited: 16/10/2024

ISSN (electronic): 2049-2618

Publisher: BioMed Central Ltd.

URL: https://doi.org/10.1186/s40168-023-01629-4

DOI: 10.1186/s40168-023-01629-4

Data Access Statement: The datasets analysed during the current study are available in the NCBI SRA repository under the BioProject ID numbers PRJNA294999, PRJNA482213 and PRJNA680446.


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Funding

Funder referenceFunder name
King Abdullah University of Science and Technology

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