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Lynch syndrome diagnostic testing pathways in endometrial cancers: a nationwide English registry-based study

Lookup NU author(s): Professor Sir John BurnORCiD

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This work is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).


Abstract

© Author(s) (or their employer(s)) 2024. Re-use permitted under CC BY. Published by BMJ. BACKGROUND: For female patients with Lynch syndrome (LS), endometrial cancer (EC) is often their first cancer diagnosis. A testing pathway of somatic tumour testing triage followed by germline mismatch repair (MMR) gene testing is an effective way of identifying the estimated 3% of EC caused by LS. METHODS: A retrospective national population-based observational study was conducted using comprehensive national data collections of functional, somatic and germline MMR tests available via the English National Cancer Registration Dataset. For all EC diagnosed in 2019, the proportion tested, median time to test, yield of abnormal results and factors influencing testing pathway initiation were examined. RESULTS: There was an immunohistochemistry (IHC) or microsatellite instability (MSI) test recorded for 17.8% (1408/7928) of patients diagnosed with EC in 2019. Proportions tested varied by Cancer Alliance and age. There was an MLH1 promoter hypermethylation test recorded for 43.1% (149/346) of patients with MLH1 protein IHC loss or MSI. Of patients with EC eligible from tumour-testing, 25% (26/104) had a germline MMR test recorded. Median time from cancer diagnosis to germline MMR test was 315 days (IQR 222-486). CONCLUSION: This analysis highlights the regional variation in recorded testing, patient attrition, delays and missed opportunities to diagnose LS, providing an informative baseline for measuring the impact of the national guidance from the National Institute for Health and Care Excellence on universal reflex LS testing in EC, implemented in 2020.


Publication metadata

Author(s): Loong L, Huntley C, Pethick J, McRonald F, Santaniello F, Shand B, Tulloch O, Goel S, Luchtenborg M, Allen S, Torr B, Snape K, George A, Lalloo F, Norbury G, Eccles DM, Tischkowitz M, Antoniou AC, Pharoah P, Shaw A, Morris E, Burn J, Monahan K, Hardy S, Turnbull C

Publication type: Article

Publication status: Published

Journal: Journal of Medical Genetics

Year: 2024

Volume: 61

Issue: 12

Pages: 1080-1088

Print publication date: 25/11/2024

Online publication date: 21/10/2024

Acceptance date: 18/09/2024

Date deposited: 06/01/2025

ISSN (print): 0022-2593

ISSN (electronic): 1468-6244

Publisher: BMJ Publishing Group

URL: https://doi.org/10.1136/jmg-2024-110231

DOI: 10.1136/jmg-2024-110231

Data Access Statement: Data are available on reasonable request. All data relevant to the study are included in the article or uploaded as supplementary information. Summary data relevant to the study are included in the article and supplementary material. Patient-level data used in this study are held within NDRS and available to access following application. Summary statistics for somatic Lynch syndrome testing are available at https://digital.nhs.uk/ndrs/data/data-outputs/cancer-data-hub/somatic-molecular-dashboard. Germline coding DNA sequence variants are made publicly available for clinical variant interpretation purposes, as variant-specific observation frequencies on public database https://canvaruk.org/

PubMed id: 39433398


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Funding

Funder referenceFunder name
18PG0019Bowel Cancer UK
Cancer Research UK (C8620/A8372)
Wellcome Trust (203924/Z/16/Z)

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