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Lookup NU author(s): Dr Katherine DuncanORCiD
This work is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License (CC BY-NC 4.0).
© 2025 The Author(s) 2024. The Natural Products Atlas is a database of microbially derived natural products that contains structures, producing organism taxonomy, biosynthetic and chemical ontology classifications, grouping by compound classes and cross-links to a suite of other natural product-related data resources. The database is supported by a web server that includes functionality to browse the collection, search the database using both chemical structures and text/numerical terms and visualize the chemical diversity it contains using interactive dashboards. In the current database release, we have curated 1347 papers, increasing the number of compounds to 36 545. In addition, we have initiated a large-scale effort to incorporate data from papers reporting structural reassignments and revisions to previously published structures. This effort led to the incorporation of 590 corrections to existing entries, significantly improving the accuracy of the dataset. The Natural Products Atlas may be accessed at www.npatlas.org.
Author(s): Poynton EF, Van Santen JA, Pin M, Contreras MM, McMann E, Parra J, Showalter B, Zaroubi L, Duncan KR, Linington RG
Publication type: Article
Publication status: Published
Journal: Nucleic Acids Research
Year: 2025
Volume: 53
Issue: D1
Pages: D691-D699
Print publication date: 06/01/2025
Online publication date: 26/11/2024
Acceptance date: 24/10/2024
Date deposited: 22/01/2025
ISSN (print): 0305-1048
ISSN (electronic): 1362-4962
Publisher: Oxford University Press
URL: https://doi.org/10.1093/nar/gkae1093
DOI: 10.1093/nar/gkae1093
Data Access Statement: The data underlying this article are available in the Natural Products Atlas at www.npatlas.org. Documentation for the API is available at https://www.npatlas.org/api/v1/docs. Previous releases of the Natural Products Atlas database are available in Zenodo at https://dx.doi.org/10.5281/zenodo.3530792.
PubMed id: 39588755
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