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Transcriptomic sex differences in early human fetal brain development

Lookup NU author(s): Dr Aragorn JonesORCiD

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This work is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).


Abstract

© The Author(s) 2025.The influence of sex chromosomes and sex hormones on early human brain development is poorly understood. We therefore undertook transcriptomic analysis of 46,XY and 46,XX human brain cortex samples (n = 64) at four different time points between 7.5 and 17 weeks post conception (wpc), in two independent studies. This developmental period encompasses the onset of testicular testosterone secretion in the 46,XY fetus (8wpc). We show differences in sex chromosome gene expression including X-inactivation genes (XIST, TSIX) in 46,XX samples; core Y chromosome genes (n = 18) in 46,XY samples; and two Y chromosome brain specific genes, PCDH11Y and RP11-424G14.1. PCDH11Y (protocadherin11 Y-linked) regulates excitatory neurons; this gene is unique to humans and is implicated in language development. RP11-424G14.1 is a long non-coding RNA. Fewer differences in sex hormone pathway-related genes are seen. The androgen receptor (AR, NR3C4) shows cortex expression in both sexes, which decreases with age. Global cortical sex hormone effects are not seen, but more localized AR mechanisms may be important with time (e.g., hypothalamus). Taken together, our data suggest that limited but potentially important sex differences occur during early human fetal brain development. (Figure presented.)


Publication metadata

Author(s): Buonocore F, Suntharalingham JP, Ogunbiyi OK, Jones A, Moreno N, Niola P, Brooks T, Solanky N, Dattani MT, del Valle I, Achermann JC

Publication type: Article

Publication status: Published

Journal: Communications Biology

Year: 2025

Volume: 8

Issue: 1

Online publication date: 25/04/2025

Acceptance date: 09/04/2025

Date deposited: 13/05/2025

ISSN (electronic): 2399-3642

Publisher: Nature Research

URL: https://doi.org/10.1038/s42003-025-08070-3

DOI: 10.1038/s42003-025-08070-3

PubMed id: 40281071


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Funding

Funder referenceFunder name
MR/R006237/1Medical Research Council (MRC)
the Joint MRC/Wellcome Trust (Grant 226202/Z/22/Z)
the Joint MRC/Wellcome Trust (Grant MR/X008304/1)
the Wellcome Trust (grant 209328/Z/17/Z)

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