Toggle Main Menu Toggle Search

Open Access padlockePrints

The Newcastle University research output collection, currently available on ePrints, will shortly be moving to a new open repository platform, Figshare. To prepare for the data migration we have paused adding new content to ePrints, and will resume once the new repository is launched. During this time you will continue to have access to ePrints (but no new content will appear). We will share updates here when available.

Bayesian inference of reproduction number from epidemiological and genetic data using particle MCMC

Lookup NU author(s): Dr Jere KoskelaORCiD

Downloads

Licence

This work is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

Publication metadata

Author(s): Gill A, Koskela J, Didelot X, Everitt RG

Publication type: Article

Publication status: Published

Journal: Journal of the Royal Statistical Society, Series C

Year: 2025

Pages: Epub ahead of print

Online publication date: 02/12/2025

Acceptance date: 05/11/2025

Date deposited: 22/12/2025

ISSN (print): 0035-9254

ISSN (electronic): 1467-9876

Publisher: Oxford University Press

URL: https://doi.org/10.1093/jrsssc/qlaf065

DOI: 10.1093/jrsssc/qlaf065

Data Access Statement: The implementation of EpiSky in R is available at https://github.com/alicia-gill/EpiSky. Simulated data and all analyses code is available at https://github.com/alicia-gill/EpiSkyPaperCode. The HIV-1 dataset is from Dennis et al. (2021) and Didelot et al. (2023). The TB dataset is from Eldholm et al. (2015).

Altmetrics

Altmetrics provided by Altmetric

Share