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Late onset presentation of nephrocalcinosis and nephrolithiasis in association with a heterozygous CYP24A1 pathogenic variant

Lookup NU author(s): Dr Holly Mabillard, Rob Geraghty, Professor John SayerORCiD

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This work is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).


Abstract

© The Author(s) 2025. CYP24A1 is gene that encodes one of the cytochrome P450 superfamily enzymes involved in the breakdown of 1,25-dihydroxyvitamin D3. Genetic variants in CYP24A1 lead to a range of phenotypical and biochemical presentations, including idiopathic infantile hypercalcemia, elevated concentrations of 1,25 dihydroxy vitamin D, adult onset nephrocalcinosis, hypercalciuria, hypercalcemia and nephrolithiasis. Here we present an adult female, aged 68 years of age who presented with intermittent abdominal pain, with a past medical history of hypertension. There was a history of oral vitamin D supplementation, however patient denied tanning bed use. There was a family history of kidney stones, with her mother having recurrent kidney stones. Investigations revealed normal serum calcium and total vitamin D levels but evidence of hypercalciuria. Abdominal imaging revealed bilateral nephrocalcinosis. A genetic screen revealed a heterozygous pathogenic variant in CYP24A1. She was managed with stopping vitamin D supplements and encouraging a high fluid intake and initiation of a thiazide diuretic which led to a normalisation of urinary calcium levels. The case exemplifies late onset genetic disease secondary to CYP24A1 loss of function, likely triggered by excessive vitamin D supplementation.


Publication metadata

Author(s): Abouzeina M, Mead P, Okpongete R, Mabillard H, Geraghty R, Sayer JA

Publication type: Article

Publication status: Published

Journal: Journal of Rare Diseases

Year: 2025

Volume: 4

Online publication date: 03/09/2025

Acceptance date: 19/08/2025

Date deposited: 19/01/2026

ISSN (electronic): 2731-085X

Publisher: Springer Nature

URL: https://doi.org/10.1007/s44162-025-00116-8

DOI: 10.1007/s44162-025-00116-8

Data Access Statement: No datasets were generated or analysed during the current study.


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Funding

Funder referenceFunder name
LifeArc
Medical Research Council
Medical Research Council Clinical Doctoral Training Fellow (MR/V028723/1)
National Institute of Health and Care Research Doctoral Fellow (NIHR304667)
Northern Counties Kidney Research Fund
Research UK (Paed_RP_001_20180925)

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