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Arylsulfamates inhibit colonic Bacteroidota growth through a sulfatase-independent mechanism

Lookup NU author(s): Dr David BolamORCiD

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This work is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).


Abstract

Copyright © 2025 the Author(s).Excessive degradation of the colonic mucin layer by Bacteroides within the human gut microbiota drives inflammatory bowel disease (IBD) in mice. Bacterial carbohydrate sulfatases are key enzymes in gut colonization, and they are elevated in human IBD and correlate with disease severity. Selective inhibitors of carbohydrate sulfatases could function as sulfatase-selective drugs, allowing precise control of sulfatase activity while preserving these otherwise beneficial bacteria. Arylsulfamates are covalent inhibitors that target a catalytic formylglycine residue of steroid sulfatases, a residue that is also conserved in carbohydrate sulfatases. Here, we find that a library of aryl- and carbohydrate sulfamates is ineffective against carbohydrate sulfatases, yet can inhibit human gut microbiota (HGM) species grown on sulfated glycans. Leveraging thermal proteome profiling (TPP), we identify a lipid kinase as the target responsible for these effects. This work highlights the imperative for developing specific inhibitors targeting carbohydrate sulfatases and reveals the adverse effects that arylsulfamates have on Bacteroides species of the HGM.


Publication metadata

Author(s): Crawford CJ, Tomlinson CWE, Gunawan C, Chen Z, Byrne DP, Darby C, Conti MLG, Larson T, Luis AS, Elli S, Yates EA, Bolam DN, Van Der Post S, Williams SJ, Cartmell A

Publication type: Article

Publication status: Published

Journal: Proceedings of the National Academy of Sciences of the United States of America

Year: 2025

Volume: 122

Issue: 28

Print publication date: 15/07/2025

Online publication date: 10/07/2025

Acceptance date: 13/06/2025

Date deposited: 29/07/2025

ISSN (print): 0027-8424

ISSN (electronic): 1091-6490

Publisher: National Academy of Sciences

URL: https://doi.org/10.1073/pnas.2414331122

DOI: 10.1073/pnas.2414331122

Data Access Statement: Mass spectrometry data have been deposited in ProteomeXchange consortium via PRIDE (PXD065411) (42). Raw data files and data tables in .csv format including descriptions of samples and their associated files, and lipid annotations for all detected lipids and associated features areas across files, have been uploaded to MassIVE dataset MSV000098236 (43). All study data are included in the article and/or supporting information.

PubMed id: 40638084


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Funding

Funder referenceFunder name
Australian Research Council
Academy of Medical Sciences
RGS\R2\212050
Royal Society
Wellcome Trust

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