Dr Goksel Misirli
Professor Anil Wipat
Dr Jennifer Hallinan
| Modelling the fitness landscapes of a SCRaMbLEd yeast genome | 2022 |
|
Dr Bradley Brown
Jasmine Bird
Dr Angel Goni-Moreno
James Alastair McLaughlin McLaughlin
Dr Goksel Misirli
et al. | Capturing Multicellular System Designs Using Synthetic Biology Open Language (SBOL) | 2020 |
|
James Alastair McLaughlin McLaughlin
Dr Goksel Misirli
Dr Matthew Pocock
Professor Anil Wipat
Professor Christopher Myers
et al. | Synthetic biology open language visual (SBOL visual) version 2.2 | 2020 |
|
James Alastair McLaughlin McLaughlin
Dr Goksel Misirli
Professor Anil Wipat
| The Synthetic Biology Open Language (SBOL) Version 3: Simplified Data Exchange for Bioengineering | 2020 |
|
Dr Goksel Misirli
Professor Anil Wipat
| Harmonizing semantic annotations for computational models in biology | 2019 |
|
Dr Goksel Misirli
Dr Angel Goni-Moreno
James Alastair McLaughlin McLaughlin
Professor Christopher Myers
Dr Phillip Lord
et al. | SBOL-OWL: An Ontological Approach for Formal and Semantic Representation of Synthetic Biology Information | 2019 |
|
James Alastair McLaughlin McLaughlin
Professor Christopher Myers
Zach Zundel
Dr Goksel Misirli
Dr Dana Ofiteru
et al. | SynBioHub: A Standards-Enabled Design Repository for Synthetic Biology | 2018 |
|
Professor Christopher Myers
James Alastair McLaughlin McLaughlin
Dr Goksel Misirli
Professor Anil Wipat
| A standard-enabled workflow for synthetic biology | 2017 |
|
James Alastair McLaughlin McLaughlin
Dr Goksel Misirli
Zach Zundel
Professor Anil Wipat
| A synthetic biology workflow using SBOL | 2017 |
|
Dr Goksel Misirli
Dr Phillip Lord
| Tawny-SBOL: Using ontologies to design and constrain genetic circuits | 2017 |
|
Dr Goksel Misirli
Dr Curtis Madsen
Owen Gilfellon
Dr Paolo Zuliani
Professor Anil Wipat
et al. | Annotation of rule-based models with formal semantics to enable creation, analysis, reuse and visualisation | 2016 |
|
Dr Goksel Misirli
Dr Jennifer Hallinan
Dr Phillip Lord
James Alastair McLaughlin McLaughlin
Professor Anil Wipat
et al. | Data Integration and Mining for Synthetic Biology Design | 2016 |
|
Dr Goksel Misirli
Zach Zundel
Professor Anil Wipat
Professor Christopher Myers
| libSBOLj 2.0: A Java Library to Support SBOL 2.0 | 2016 |
|
Dr Goksel Misirli
Dr Curtis Madsen
Professor Anil Wipat
| Sharing Structure and Function in Biological Design with SBOL 2.0 | 2016 |
|
Dr Curtis Madsen
James Alastair McLaughlin McLaughlin
Dr Goksel Misirli
Dr Keith Flanagan
Dr Jennifer Hallinan
et al. | The SBOL Stack: A Platform for Storing, Publishing, and Sharing Synthetic Biology Designs | 2016 |
|
James Alastair McLaughlin McLaughlin
Dr Goksel Misirli
Dr Curtis Madsen
Professor Anil Wipat
| VisBOL: Web-Based Tools for Synthetic Biology Design Visualization | 2016 |
|
Dr Matthew Pocock
Dr Curtis Madsen
Dr Goksel Misirli
Professor Anil Wipat
| Proposed Data Model for the Next Version of the Synthetic Biology Open Language | 2015 |
|
Dr Goksel Misirli
Dr Matthew Pocock
| The Synthetic Biology Open Language | 2015 |
|
Dr Goksel Misirli
Dr Jennifer Hallinan
Professor Anil Wipat
| BacillusRegnet: a transcriptional regulation database and analysis platform for Bacillus species | 2014 |
|
Dr Goksel Misirli
Dr Jennifer Hallinan
Professor Anil Wipat
| Composable Modular Models for Synthetic Biology | 2014 |
|
Dr Goksel Misirli
Dr Jennifer Hallinan
Professor Anil Wipat
| Composable modular models for synthetic biology | 2014 |
|
Dr Matthew Pocock
Dr Jennifer Hallinan
Dr Goksel Misirli
Professor Anil Wipat
| The Synthetic Biology Open Language (SBOL) provides a community standard for communicating designs in synthetic biology | 2014 |
|
Dr Jennifer Hallinan
Owen Gilfellon
Dr Goksel Misirli
Professor Anil Wipat
| Tuning Receiver Characteristics in Bacterial Quorum Communication: An Evolutionary Approach Using Standard Virtual Biological Parts | 2014 |
|
Dr Goksel Misirli
Professor Anil Wipat
Joseph Mullen
Dr Katherine James
Dr Matthew Pocock
et al. | BacillOndex: An Integrated Data Resource for Systems and Synthetic Biology | 2013 |
|
Dr Susanne Pohl
John Hulme
Dr Goksel Misirli
Dr David Radford
Dr Wayne Smith
et al. | Proteomic analysis of Bacillus subtilis strains engineered for improved production of heterologous proteins | 2013 |
|
Dr Goksel Misirli
Dr Jennifer Hallinan
Dr Matthew Pocock
Dr Simon Cockell
Jochen Weile
et al. | BacillOndex: An Integrated Data Resource for Systems and Synthetic Biology | 2011 |
|
Dr Goksel Misirli
Dr Jennifer Hallinan
Professor Anil Wipat
| Model annotation for synthetic biology: automating model to nucleotide sequence conversion | 2011 |
|
Dr Goksel Misirli
| SBML Level 3 Package Proposal: Annotation | 2011 |
|
Dr Curtis Madsen
Dr Goksel Misirli
Professor Anil Wipat
| Synthetic Biology Open Language (SBOL) Version 1.0.0 | 2011 |
|
Dr Jennifer Hallinan
Dr Goksel Misirli
Professor Anil Wipat
| Evolutionary computation for the design of a stochastic switch for synthetic genetic circuits | 2010 |
|
Dr Goksel Misirli
Dr Jennifer Hallinan
Professor Anil Wipat
| Standard virtual biological parts: a repository of modular modeling components for synthetic biology | 2010 |
|
