Publications by Dr Arnaud Basle - ePrints

Browsing publications by Dr Arnaud Basle.

Newcastle Authors	Title	Year
Karla Helena Bueno Chinenye Ekemezie Charlotte Brown Charlotte Dingwall Dr Arnaud Basle et al.	A new family of bacterial ribosome hibernation factors	2024
Dr Thomas McCorvie Dr Jiazhi Tang Dr Arnaud Basle Professor Wyatt Yue	Architecture and regulation of filamentous human cystathionine beta-synthase	2024
Linnea Blomgren Dr Sabrina Mackinnon Dr Arnaud Basle Professor Wyatt Yue Dr Thomas McCorvie et al.	Dynamic inter-domain transformations mediate the allosteric regulation of human 5, 10-methylenetetrahydrofolate reductase	2024
Dr Martyna Pastok Dr Shannon Turberville Dr Arnaud Basle Professor Martin Noble Professor Jane Endicott et al.	Structural requirements for the specific binding of CRABP2 to cyclin D3	2024
Dr Javier Abellon-Ruiz Dr Augustinas Silale Dr Andrew Frey Dr Arnaud Basle Professor Matthias Trost et al.	BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B₁₂ uptake in gut Bacteroides	2023
Dr Augustinas Silale Dr Yiling Zhu Dr Satya Bhamidimarri Dr Arnaud Basle	Dual function of OmpM as outer membrane tether and nutrient uptake channel in diderm Firmicutes	2023
Omar Al-Jourani Dr Jenn Ross Dr Nick Bailey Dr Tiaan Heunis Joseph Manion et al.	Identification of D-arabinan-degrading enzymes in mycobacteria	2023
Jaeick Lee Rosie Dalton Dr Arnaud Basle Dr Nicolas Vita Professor Christopher Dennison et al.	Important Structural Features of Thiolate-Rich Four-Helix Bundles for Cu(I) Uptake and Removal	2023
Dr Augustinas Silale Matthew Feasey Dr Tiaan Heunis Dr Yiling Zhu Dr Hong Zheng et al.	Outer membrane utilisomes mediate glycan uptake in gut Bacteroidetes	2023
Dr Ani Paloyan Dr Armen Sargsyan Dr Cecilia Piergentili Dr Will Stanley Dr Arnaud Basle et al.	Structural and biochemical characterisation of the N-carbamoyl-β-alanine amidohydrolase from Rhizobium radiobacter MDC 8606	2023
Dr Arnaud Basle Professor Martin Noble	The CCP4 suite: integrative software for macromolecular crystallography	2023
Dr Arnaud Basle Dr Jon Marles-Wright	Versatile Chemo-Biocatalytic Cascade Driven by a Thermophilic and Irreversible C-C Bond-Forming α-Oxoamine Synthase	2023
Elise Ling Dr Arnaud Basle Dr Ian Cowell Professor Bert van den Berg Professor Caroline Austin et al.	A comprehensive structural analysis of the ATPase domain of Human DNA topoisomerase II Beta bound to AMPPNP, ADP and the bisdioxopiperazine, ICRF193	2022
Dr Arnaud Basle Dr Alan Cartmell	Author Correction: Sulfated glycan recognition by carbohydrate sulfatases of the human gut microbiota (Nature Chemical Biology, (2022), 18, 8, (841-849), 10.1038/s41589-022-01039-x)	2022
Dr John Berrisford Maria Fando Dr Arnaud Basle	CCP4 Cloud for structure determination and project management in macromolecular crystallography	2022
Dr Arnaud Basle Dr Jon Marles-Wright	Characterization of inositol lipid metabolism in gut-associated Bacteroidetes.	2022
Dr Arnaud Basle Dr David Bolam	Plant N-glycan breakdown by human gut Bacteroides	2022
Dr Jenn Ross Zak McIver Dr Cecilia Piergentili Dr Jasmine Bird Dr Kevin Waldron et al.	Pore dynamics and asymmetric cargo loading in an encapsulin nanocompartment.	2022
Professor Bert van den Berg Dr Augustinas Silale Dr Arnaud Basle	Structural basis for host recognition and superinfection exclusion by bacteriophage T5.	2022
Paola Lanzoni Dr Anna Barwinska-Sendra Dr Arnaud Basle Professor Paula Salgado	Structure and assembly of the S-layer in C. difficile	2022
Dr Arnaud Basle Dr Alan Cartmell	Sulfated glycan recognition by carbohydrate sulfatases of the human gut microbiota	2022
Dr Satya Bhamidimarri Dr Arnaud Basle Professor Bert van den Berg	Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site	2021
Dr Marco Salamina Dr Richard Heath Svitlana Korolchuk Dr Arnaud Basle Dr Martyna Pastok et al.	Discriminative SKP2 Interactions with CDK-Cyclin Complexes Support a Cyclin A-Specific Role in p27KIP1 Degradation	2021
Declan Gray Amy Glenwright Dr Arnaud Basle Carl Morland Dr David Bolam et al.	Insights into SusCD-mediated glycan import by a prominent gut symbiont	2021
Adam Crawshaw Dr Arnaud Basle Professor Paula Salgado	A practical overview of molecular replacement: Clostridioides difficile PilA1, a difficult case study	2020
Dr Anna Barwinska-Sendra Dr Kacper Sendra Dr Arnaud Basle Eilidh Mackenzie Dr Emma Tarrant et al.	An evolutionary path to altered cofactor specificity in a metalloenzyme	2020
Dr Arnaud Basle	Ascertaining the biochemical function of an essential pectin methylesterase in the gut microbe bacteroides thetaiotaomicron	2020
Dr Didier Ndeh Dr Arnaud Basle Professor Henrik Strahl von Schulten Dr Alan Cartmell	Author Correction: Metabolism of multiple glycosaminoglycans by Bacteroides thetaiotaomicron is orchestrated by a versatile core genetic locus (Nature Communications, (2020), 11, 1, (646), 10.1038/s41467-020-14509-4)	2020
Dr Cecilia Piergentili Dr Will Stanley Laurene Adam Dr Arnaud Basle Dr Kevin Waldron et al.	Dissecting the structural and functional roles of a putative metal entry site in encapsulated ferritins	2020
Dr Didier Ndeh Dr Arnaud Basle Professor Henrik Strahl von Schulten Dr Alan Cartmell	Metabolism of multiple glycosaminoglycans by Bacteroides thetaiotaomicron is orchestrated by a versatile core genetic locus	2020
Dr Lucy Crouch Dr Arnaud Basle Professor Chris Lamb Professor Christopher Stewart Kate Cooke et al.	Prominent members of the human gut microbiota express endo-acting O-glycanases to initiate mucin breakdown	2020
Mariusz Madej Dr Arnaud Basle Professor Bert van den Berg	Structural and functional insights into oligopeptide acquisition by the RagAB transporter from Porphyromonas gingivalis	2020
Dr Anne Doble Dr David Bulmer Dr Arnaud Basle Professor Bert van den Berg	Uptake of monoaromatic hydrocarbons during biodegradation by FadL channel-mediated lateral diffusion	2020
Dr Alan Cartmell Dr Jose Munoz Munoz Dr Jonathan Briggs Dr Didier Ndeh Dr Elisabeth Lowe et al.	Author Correction: A surface endogalactanase in Bacteroides thetaiotaomicron confers keystone status for arabinogalactan degradation	2019
Dr Aurore Labourel Dr Arnaud Basle Dr Jose Munoz Munoz Dr Didier Ndeh Simon Booth et al.	Structural and functional analyses of glycoside hydrolase 138 enzymes targeting chain A galacturonic acid in the complex pectin rhamnogalacturonan II	2019
Dr Anna Barwinska-Sendra Dr Arnaud Basle Dr Kevin Waldron	A charge polarization model for the metal-specific activity of superoxide dismutases	2018
Dr Alan Cartmell Dr Jose Munoz Munoz Dr Jonathan Briggs Dr Didier Ndeh Dr Elisabeth Lowe et al.	A surface endogalactanase in Bacteroides thetaiotaomicron confers keystone status forarabinogalactan degradation	2018
Dr Arnaud Basle Dr Lorraine Hewitt Dr Alan Koh Dr Heather Lamb Paul Thompson et al.	Crystal structure of NucB, a biofilm-degrading endonuclease	2018
Dr Javier Abellon-Ruiz Dr Michael Zahn Dr Arnaud Basle Professor Bert van den Berg	Crystal structure of the Acinetobacter baumannii outer membrane protein Omp33	2018
Dr Jonathan Briggs Xiaoyang Zhang Dr Didier Ndeh Dr Aurore Labourel Dr Arnaud Basle et al.	Dietary pectic glycans are degraded by coordinated enzyme pathways in human colonic Bacteroides	2018
Dr Arnaud Basle Dr Abdelnasser El Ghazouani Jaeick Lee Professor Christopher Dennison	Insight into Metal Removal from Peptides that Sequester Copper for Methane Oxidation	2018
Anuwat Aunkham Dr Michael Zahn Dr Arnaud Basle Dr Wipa Suginta Professor Bert van den Berg et al.	Structural basis for chitin acquisition by marine Vibrio species	2018
Dr Arnaud Basle Emeritus Professor Harry Gilbert Dr Didier Ndeh	Target highlights from the first post-PSI CASP experiment (CASP12, May-August 2016)	2018
Monisha Pathania Dr Arnaud Basle Professor Bert van den Berg	Unusual constriction zones in the major porins OmpU and OmpT from Vibrio cholerae	2018
Judith Unterlass Dr Arnaud Basle Dr Julie Tucker Dr Celine Cano Professor Martin Noble et al.	Validating and enabling phosphoglycerate dehydrogenase (PHGDH) as a target for fragment-based drug discovery in PHGDH-amplified breast cancer	2018
Dr Max Temple Dr Fiona Cuskin Dr Arnaud Basle Emeritus Professor Harry Gilbert Dr Elisabeth Lowe et al.	A Bacteroidetes locus dedicated to fungal 1,6-β-glucan degradation: unique substrate conformation drives specificity of the key endo-1,6-β-glucanase	2017
Dr Jose Munoz Munoz Dr Alan Cartmell Dr Arnaud Basle Emeritus Professor Harry Gilbert	An evolutionarily distinct family of polysaccharide lyases removes rhamnose capping of complex arabinogalactan proteins	2017
Dr Didier Ndeh Dr Artur Rogowski Dr Alan Cartmell Ana De Jesus Vaz Luís Dr Arnaud Basle et al.	Complex pectin metabolism by gut bacteria reveals novel catalytic functions	2017
Dr Alan Cartmell Dr Elisabeth Lowe Dr Arnaud Basle Dr Susan Firbank Dr Didier Ndeh et al.	How members of the human gut microbiota overcome the sulfation problem posed by glycosaminoglycans	2017
Dr Javier Abellon-Ruiz Dr Arnaud Basle Professor Bert van den Berg	Structural basis for maintenance of bacterial outer membrane lipid asymmetry	2017
Amy Glenwright Dr Arnaud Basle Dr Susan Firbank Dr Hong Zheng Dr David Bolam et al.	Structural basis for nutrient acquisition by dominant members of the human gut microbiota	2017
Judith Unterlass Dr Arnaud Basle Dr Julie Tucker Dr Celine Cano Professor Martin Noble et al.	Structural insights into the enzymatic activity and potential substrate promiscuity of human 3-phosphoglycerate dehydrogenase (PHGDH)	2017
Dr Arnaud Basle Semeli Platsaki Professor Christopher Dennison	Visualizing Biological Copper Storage: The Importance of Thiolate-Coordinated Tetranuclear Clusters	2017
Gianpiero Landolfi Dr Arnaud Basle Semeli Platsaki Jaeick Lee Dr Kevin Waldron et al.	Bacterial cytosolic proteins with a high capacity for Cu(I) that protect against copper toxicity	2016
Dr Imma Venditto Ana De Jesus Vaz Luís Dr Arnaud Basle Emeritus Professor Harry Gilbert Professor William Willats et al.	Complexity of the Ruminococcus flavefaciens cellulosome reflects an expansion in glycan recognition	2016
Dr Lucy Crouch Dr Fiona Cuskin Justina Briliūtė Dr Arnaud Basle Dr David Bolam et al.	Degradation of complex N-glycans by gut Bacteroides species	2016
Dr Elisabeth Lowe Dr Fiona Cuskin Dr Max Temple Dr Arnaud Basle Emeritus Professor Harry Gilbert et al.	Fungal cell wall glucan metabolism by Bacteroides in the human gut	2016
Nat ARUNMANEE Monisha Pathania Dr Alexandra Solovyova Dr Arnaud Basle Professor Bert van den Berg et al.	Gram-negative trimeric porins have specific LPS binding sites that are essential for porin biogenesis	2016
Dr Fiona Cuskin Dr Lucy Crouch Dr Arnaud Basle Dr David Bolam Emeritus Professor Harry Gilbert et al.	Pivotal alpha mannosidase generates specificity for N-glycans through requirement for GlcNac at+2 subsite.	2016
Professor Bert van den Berg Anupama Chembath Dr Arnaud Basle Dr Julian Rutherford	Structural basis for Mep2 ammonium transceptor activation by phosphorylation	2016
Dr Michael Zahn Dr Arnaud Basle Professor Bert van den Berg	Structural Insights into Outer Membrane Permeability of Acinetobacter baumannii	2016
Dr Imma Venditto Ana De Jesus Vaz Luís Dr Julia Schuckel Dr Arnaud Basle Emeritus Professor Harry Gilbert et al.	The complexity of the Ruminococcus flavefaciens cellulosome reflects an expansion in glycan recognition	2016
Dr Aurore Labourel Dr Lucy Crouch Dr Adam Jackson Dr Artur Rogowski Dr Joseph Gray et al.	The Mechanism by Which Arabinoxylanases Can Recognize Highly Decorated Xylans	2016
Dr Nicolas Vita Semeli Platsaki Dr Arnaud Basle Stephen Allen Dr Kevin Waldron et al.	A four-helix bundle stores copper for methane oxidation	2015
Dr Artur Rogowski Jon Briggs Dr Elisabeth Lowe Dr Arnaud Basle Carl Morland et al.	Glycan complexity dictates microbial resource allocation in the large intestine	2015
Dr Michael Zahn Dr Arnaud Basle Professor Bert van den Berg	Small-Molecule Transport by CarO, an Abundant Eight-Stranded β-Barrel Outer Membrane Protein from Acinetobacter baumannii	2015
Dr Fiona Cuskin Dr Arnaud Basle Dr Alison Day Emeritus Professor Harry Gilbert Dr Elisabeth Lowe et al.	The GH130 Family of Mannoside Phosphorylases Contains Glycoside Hydrolases That Target β-1,2-Mannosidic Linkages in Candida Mannan	2015
William Wilson Dr Hue Hornig - Do Dr Francesco Bruni Professor Rick Lewis Dr Lorraine Hewitt et al.	A human mitochondrial poly(A) polymerase mutation reveals the complexities of post-transcriptional mitochondrial gene expression	2014
Dr Artur Rogowski Dr Arnaud Basle Dr Alexandra Solovyova Emeritus Professor Harry Gilbert Dr David Bolam et al.	Evidence That GH115 alpha-Glucuronidase Activity, Which Is Required to Degrade Plant Biomass, Is Dependent on Conformational Flexibility	2014
Dr Arnaud Basle Professor Rick Lewis	Some of the most interesting CASP11 targets through the eyes of their authors	2014
Dr Robert Cleverley Dr Arnaud Basle Dr Nhat Khai Bui Dr Lorraine Hewitt Dr Alexandra Solovyova et al.	Structure and function of a spectrin-like regulator of bacterial cytokinesis	2014
Dr Adriana Badarau Dr Arnaud Basle Dr Susan Firbank Professor Christopher Dennison	Crosstalk between Cu(I) and Zn(II) homeostasis via Atx1 and cognate domains	2013
Dr Adriana Badarau Dr Arnaud Basle Dr Susan Firbank Professor Christopher Dennison	Investigating the Role of Zinc and Copper Binding Motifs of Trafficking Sites in the Cyanobacterium Synechocystis PCC 6803	2013
Dr Max Temple Dr Artur Rogowski Dr Arnaud Basle Emeritus Professor Harry Gilbert	Understanding How Noncatalytic Carbohydrate Binding Modules Can Display Specificity for Xyloglucan	2013
Dr Elisabeth Lowe Dr Arnaud Basle Dr Susan Firbank Dr David Bolam	A scissor blade-like closing mechanism implicated in transmembrane signaling in a Bacteroides hybrid two-component system	2012
Dr Fiona Cuskin Dr James Flint Carl Morland Dr Arnaud Basle Dr Alexandra Solovyova et al.	How nature can exploit nonspecific catalytic and carbohydrate binding modules to create enzymatic specificity	2012
Dr John Berrisford Dr Arnaud Basle Professor Rick Lewis Dr Jon Marles-Wright	The Bacterial Stressosome: A Modular System that Has Been Adapted to Control Secondary Messenger Signaling	2012
Dr Abdelnasser El Ghazouani Dr Arnaud Basle Dr Joseph Gray Professor David Graham Dr Susan Firbank et al.	Variations in methanobactin structure influences copper utilization by methane-oxidizing bacteria	2012
Cedric Montanier Dr James Flint Dr Arnaud Basle Professor Rick Lewis Emeritus Professor Harry Gilbert et al.	A novel, noncatalytic carbohydrate-binding module displays specificity for galactose-containing polysaccharides through calcium-mediated oligomerization	2011
Dr Abdelnasser El Ghazouani Dr Arnaud Basle Dr Susan Firbank Dr Charles Knapp Dr Joseph Gray et al.	Copper-Binding Properties and Structures of Methanobactins from Methylosinus trichosporium OB3b	2011
Dr Arnaud Basle	Disulfide bond tethering of extracellular loops does not affect the closure of OmpF porin at acidic pH	2010