Publications by Dr Matthew Bashton - ePrints

Browsing publications by Dr Matthew Bashton.

Newcastle Authors	Title	Year
Claire Schwab Dr Ruth Cranston Dr Sarra Ryan Ellie Butler Emily Winterman et al.	Integrative genomic analysis of childhood acute lymphoblastic leukaemia lacking a genetic biomarker in the UKALL2003 clinical trial	2023
Sarra Ryan Dr Ruth Cranston Claire Schwab Dr Matthew Bashton Dr Paul Sinclair et al.	The genomic landscape of acute lymphoblastic leukemia with intrachromosomal amplification of chromosome 21	2023
Dr Stacey Richardson Dr Rebecca Hill Dr Christopher Kui Dr Janet Lindsey Dr Yura Grabovska et al.	Emergence and maintenance of actionable genetic drivers at medulloblastoma relapse	2022
Dr Christopher Duncan Dr Rebecca Payne Dr Darren Smith Dr Matthew Bashton Dr Roy Sanderson et al.	Publisher Correction: SARS-CoV-2 Omicron is an immune escape variant with an altered cell entry pathway (Nature Microbiology, (2022), 7, 8, (1161-1179), 10.1038/s41564-022-01143-7)	2022
Dr Yusri Taha Dr Ewan Hunter Dr Wendy Osborne Dr Matthew Bashton Dr Darren Smith et al.	Persistent SARS-CoV-2 infection in patients with secondary antibody deficiency: successful clearance following combination casirivimab and imdevimab (REGN-COV2) monoclonal antibody therapy	2021
Dr Matthew Bashton Professor Christine Harrison FRCPath FMedSci	IKZF1 Deletions with COBL Breakpoints Are Not Driven by RAG-Mediated Recombination Events in Acute Lymphoblastic Leukemia	2019
Dr Paul Sinclair Dr Sarra Ryan Dr Matthew Bashton Shaun Hollern Rebecca Hanna et al.	SH2B3 inactivation through CN-LOH-12q is uniquely associated with B-cell precursor ALL with iAMP21 or other chromosome 21 gain	2019
Dr Ruth Cranston Dr Paul Sinclair Dr Matthew Bashton Dr Matthew Selby Professor Christine Harrison FRCPath FMedSci et al.	A Genome-Wide CRISPR Screen Implicates MYC Dysregulation in TCF3-PBX1 B-ALL	2018
Dr Paul Sinclair Dr Helen Blair Dr Sarra Ryan Dr Lars Buechler Joanna Cheng et al.	Dynamic clonal progression in xenografts of acute lymphoblastic leukemia with intrachromosomal amplification of chromosome 21	2018
Dr Lauren Walker Dr Jonathan Coxhead Dr Ian Wilson Dr Matthew Bashton Dr Christopher Morris et al.	High prevalence of focal and multi-focal somatic genetic variants in the human brain	2018
Dr Ed Schwalbe Dr Debbie Hicks Dr Reza Rafiee Dr Matthew Bashton Dr Amir Enshaei et al.	Minimal methylation classifier (MIMIC): A novel method for derivation and rapid diagnostic detection of disease-associated DNA methylation signatures	2017
Dr Mujdat Zeybel Dr Timothy Hardy Gemma Zeybel Dr Matthew Bashton Professor John Mathers et al.	DNA methylation profiling identifies novel markers of progression in hepatitis B-related chronic liver disease	2016
Dr Martina Finetti Matthew Selby Dr Matthew Bashton Dr Ruth Cranston Dr Stephen Crosier et al.	Integrated pathway analysis of malignant rhabdoid tumour identifies key SMARCB1-pathways and therapeutic opportunities	2016
Matthew Selby Dr Martina Finetti Dr Matthew Bashton Dr Ruth Cranston Alicia Del Carpio Pons et al.	Investigating the biology of atypical teratoid/rhabdoid tumors by whole genome CRISPR/CAS9 screening	2016
Dr Ed Schwalbe Dr Debbie Hicks Dr Reza Rafiee Dr Matthew Bashton Dr Amir Enshaei et al.	Routine Diagnostic Medulloblastoma Subgrouping Using Low-Cost, Low-Input DNA Methylomics: Application to Trials Cohorts Previously Refractory-to-Analysis	2016
Dr Ed Schwalbe Dr Debbie Hicks Dr Reza Rafiee Dr Matthew Bashton Dr Amir Enshaei et al.	Routine molecular subgrouping of medulloblastoma: Bridging the divide between research and the clinic using low-cost, mass spectrometry-based DNA methylomics	2016
Dr Sarra Ryan Elizabeth Matheson Dr Paul Sinclair Dr Matthew Bashton Claire Schwab et al.	The role of the RAS pathway in iAMP21-ALL	2016
Dr Daniel Williamson Dr Janet Lindsey Dr Debbie Hicks Dr Stephen Crosier Amanda Smith et al.	The Transcriptional Landscape of Medulloblastoma: Group 3 and Group 4 Tumours Comprise a Single Clinically Significant Expression Continuum	2016
Katie Dormon Elda Latif Dr Matthew Bashton Dr Deepali Pal Dr Helen Blair et al.	A Whole Genome In Vivo Crispr Screen in Primary ALL Predicts Leukaemic Relapse	2015
Professor Nicholas Jakubovics Jill Robinson Dr Matthew Bashton	Critical Roles of Arginine in Growth and Biofilm Development by Streptococcus gordonii	2015
Dr Simon Cockell Dr Matthew Bashton Dr Colin Gillespie	Bioconductor tools for microarray data analysis	2014
Dr Matthew Bashton	Crowdsourced analysis of ash and ash dieback through the Open Ash Dieback project: A year 1 report on datasets and analyses contributed by a self-organising community	2014
Dr Matthew Bashton	Crowdsourcing genomic analyses of ash and ash dieback – power to the people	2013
Dr Matthew Bashton	Domain-ligand mapping for enzymes	2010
Dr Matthew Bashton	Small Molecule Subgraph Detector (SMSD) toolkit	2009
Dr Matthew Bashton	PROCOGNATE: a cognate ligand domain mapping for enzymes	2008
Dr Matthew Bashton	The generation of new protein functions by the combination of domains	2007
Dr Matthew Bashton	Cognate ligand domain mapping for enzymes	2006
Dr Matthew Bashton	Structure, function and evolution of multidomain proteins	2004
Dr Matthew Bashton	Supra-domains: evolutionary units larger than single protein domains	2004
Dr Matthew Bashton	The geometry of domain combination in proteins	2002